alphafold3 · Issues· 27 open
Open on GitHubLocally synced open issues (discussions stay on GitHub)
- #742
Autotuning cache miss for PallasTritonGatedLinearUnit and Inference time increases significantly.
Updated Sep 14, 2026 - #609
AF3 runtime higher than reported for pool of proteins with 5000 tokens
questionUpdated Sep 11, 2026 - #739
CCD_6MZ (N6-methyladenosine) RNA modification causes AlphaFold Server jobs to fail; other RNA modifications unaffected
Updated Sep 9, 2026 - #735
Segmentation fault for RTX PRO6000
Updated Sep 4, 2026 - #732
Feature proposal: explicit input preflight validation mode
Updated Aug 31, 2026 - #730
Incorrect layout conversion of `ref_space_uid` in atom cross-attention
Updated Aug 30, 2026 - #236
RuntimeWarning: overflow encountered in reduce
questionUpdated Aug 17, 2026 - #432
Unified memory for extra large systems - rematerialization problems
questionUpdated Aug 11, 2026 - #714
Internal input/output error
setupquestionUpdated Aug 11, 2026 - #675
Slow featurization when running inference for same input with multiple seeds
enhancementUpdated May 22, 2026 - #189
Bond order information missing in output cif files.
enhancementquestionUpdated May 21, 2026 - #152
AF3 unable to predict covalent bonds between DNA and protein
enhancementUpdated Apr 19, 2026 - #1
First issue! Just want to say thank you!
good first issueUpdated Jan 4, 2026 - #527
AF3 cannot predict correct ligand isomer even using userCDD
questionUpdated Sep 29, 2025 - #322
Adding Docker image to container registry
enhancementUpdated Jul 18, 2025