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cellxgene

> DevOps
Open source

An interactive explorer for single-cell transcriptomics data

784 stars0 likes1 views
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An interactive explorer for single-cell transcriptomics data

GitHub Issues· 140 open

View all on GitHub
  • #2706

    [BUG] Problems with latest AnnData version

    bugUpdated Aug 15, 2026
  • #2798

    [BUG] Security scan false positives from stale mlflow in packaged server/requirements-annotate.txt

    bugUpdated Aug 7, 2026
  • #2793

    [BUG] Gene coloring returns HTTP 400 with pandas 3.0 string dtype var index

    Updated Jul 29, 2026
  • #2788

    [BUG] error loading

    bugUpdated Jun 17, 2026
  • #2709

    [BUG] CellXGene showing cells as unhighlighted with large dataset?

    bugUpdated Feb 28, 2026
  • #2754

    Error: File must be in the .h5ad format.

    bugUpdated Feb 28, 2026
  • #2707

    [QUESTION] Gene Expression Source Data

    questionUpdated Jan 6, 2026
  • #2736

    [FEATURE REQUEST] visualization of multimodal data in mudata (h5mu) format

    user requestUpdated Sep 2, 2025
  • #2733

    [QUESTION] Reconstruct original integer-based count matrix from transformed count matrix

    questionUpdated Jul 30, 2025
  • #2708

    [BUG] Links to demo datasets for Annotate are dud

    bugUpdated Apr 11, 2025

> Tags

JavaScriptdatavizscientificscrna-seqtranscriptomics

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> Details

PublishedAug 1, 2026
UpdatedSep 17, 2026
CategoryDevOps
PricingOpen source

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